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GWAS analysis combined with QTL mapping identify CPT3 and ABH as genes underlying dolichol accumulation in Arabidopsis
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  • Katarzyna Gawarecka,
  • Joanna Siwinska,
  • Jaroslaw Poznanski,
  • Agnieszka Onysk,
  • Przemyslaw Surowiecki,
  • Karolina Sztompka,
  • Liliana Surmacz,
  • Ji Hoon Ahn,
  • Arthur Korte,
  • Ewa Swiezewska,
  • Anna Ihnatowicz
Katarzyna Gawarecka
Polska Akademia Nauk Instytut Biochemii i Biofizyki

Corresponding Author:[email protected]

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Joanna Siwinska
Intercollegiate Faculty of Biotechnology of the University of Gdańsk and the Medical University of Gdańsk
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Jaroslaw Poznanski
Polska Akademia Nauk Instytut Biochemii i Biofizyki
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Agnieszka Onysk
Polska Akademia Nauk Instytut Biochemii i Biofizyki
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Przemyslaw Surowiecki
Polska Akademia Nauk Instytut Biochemii i Biofizyki
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Karolina Sztompka
Polska Akademia Nauk Instytut Biochemii i Biofizyki
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Liliana Surmacz
Polska Akademia Nauk Instytut Biochemii i Biofizyki
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Ji Hoon Ahn
Korea University
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Arthur Korte
Center for Computational and Theoretical Biology, University of Wurzburg
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Ewa Swiezewska
Polska Akademia Nauk Instytut Biochemii i Biofizyki
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Anna Ihnatowicz
Intercollegiate Faculty of Biotechnology of the University of Gdańsk and the Medical University of Gdańsk
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Abstract

Dolichols (Dols), ubiquitous components of living organisms, are indispensable for cell survival. In plants, as well as other eukaryotes, Dols are crucial for posttranslational protein glycosylation, aberration of which leads to fatal metabolic disorders in humans and male sterility in plants. Until now, the mechanisms underlying Dol accumulation remain elusive. In this report, we have analyzed the natural variation of the accumulation of Dols and six other isoprenoids between more than 120 Arabidopsis thaliana accessions. Subsequently, by combining QTL and GWAS approaches, we have identified several candidate genes involved in the accumulation of Dols, polyprenols, plastoquinone, and phytosterols. The role of two genes implicated in the accumulation of major Dols in Arabidopsis – the AT2G17570 gene encoding a long searched for cis-prenyltransferase (CPT3) and the AT1G52460 gene encoding an alpha-beta hydrolase (ABH) – is experimentally confirmed. These data will help to generate Dol-enriched plants which might serve as a remedy for Dol-deficiency in humans.
14 Sep 2021Submitted to Plant, Cell & Environment
14 Sep 2021Submission Checks Completed
14 Sep 2021Assigned to Editor
16 Sep 2021Reviewer(s) Assigned
09 Oct 2021Review(s) Completed, Editorial Evaluation Pending
09 Oct 2021Editorial Decision: Revise Minor
06 Nov 20211st Revision Received
06 Nov 2021Submission Checks Completed
06 Nov 2021Assigned to Editor
07 Nov 2021Review(s) Completed, Editorial Evaluation Pending
07 Nov 2021Editorial Decision: Accept