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Seascape genomics of coastal bottlenose dolphins along strong gradients of temperature and salinity
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  • Eleanor Pratt,
  • Luciano Beheregaray,
  • Kerstin Bilgmann,
  • Nikki Zanardo,
  • Fernando Diaz-Aguirre,
  • Luciana Moller
Eleanor Pratt
Flinders University

Corresponding Author:[email protected]

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Luciano Beheregaray
Flinders University
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Kerstin Bilgmann
Macquarie University
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Nikki Zanardo
Flinders University
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Fernando Diaz-Aguirre
Flinders University
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Luciana Moller
Flinders University
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Heterogeneous seascapes and strong environmental gradients in coastal waters are expected to influence adaptive divergence, particularly in species with large population sizes where selection is expected to be highly efficient. However, these influences might also extend to species characterized by strong social structure, natal philopatry and small home ranges. We implemented a seascape genomic study to test this hypothesis in Indo-Pacific bottlenose dolphins (Tursiops aduncus) distributed along the environmentally heterogeneous coast of southern Australia. The datasets included oceanographic and environmental variables thought to be good predictors of local adaptation in dolphins and 8,081 filtered single nucleotide polymorphisms (SNPs) genotyped for individuals sampled from six different bioregions. From a neutral perspective, population structure and connectivity of the dolphins were generally influenced by habitat type and social structuring. Genotype-environment association analysis identified 241 candidate adaptive loci and revealed that sea surface temperature and salinity gradients influenced adaptive divergence in these animals at both large- (1,000s km) and fine-scales (<100 km). Enrichment analysis and annotation of candidate genes revealed functions related to sodium-activated ion transport, kidney development, adipogenesis and thermogenesis. The findings of spatial adaptive divergence and inferences of putative physiological adaptations challenge previous suggestions that marine megafauna is most likely to be affected by environmental and climatic changes via indirect, trophic effects. Our work contributes to conservation management of coastal bottlenose dolphins subjected to anthropogenic disturbance and to efforts of clarifying how seascape heterogeneity influences adaptive diversity and evolution in small cetaceans.
03 Jul 2021Submitted to Molecular Ecology
05 Jul 2021Submission Checks Completed
05 Jul 2021Assigned to Editor
28 Jul 2021Reviewer(s) Assigned
15 Nov 2021Review(s) Completed, Editorial Evaluation Pending
21 Dec 2021Editorial Decision: Revise Minor
01 Feb 2022Review(s) Completed, Editorial Evaluation Pending
01 Feb 20221st Revision Received
03 Feb 2022Editorial Decision: Accept
Apr 2022Published in Molecular Ecology volume 31 issue 8 on pages 2223-2241. 10.1111/mec.16389