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A checklist for fMRI acquisition methods reporting in the literature
  • Ben Inglis
Ben Inglis

Corresponding Author:[email protected]

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I present a checklist of acquisition parameters for inclusion in the methods section of an fMRI paper. The current list expands and updates the list that was given in the 2008 paper from Poldrack et al. (I have reproduced below the section on acquisition that appeared in that 2008 paper.) The emphasis is on fMRI experiments that use 1.5 to 3 T scanners with standard hardware available today, but the list should work reasonably well for 7 T experiments as well. I further assume that fMRI is performed with 2D multi-slice EPI or spiral scanning and uses BOLD contrast, but parameter reporting for 3D sequences and other k-space trajectories as well as non-BOLD contrast should be feasible. The first full version of the checklist, version 1.1, was presented in January, 2013. Version 1.2 was released in December, 2014. This version is denoted 1.3 and will be the final series 1.x release. Release notes for this version appear below. The checklist was initially developed based on my experience with Siemens scanners but I have attempted to use generic descriptions as far as possible. Version 2.0 is planned for the end of 2015 and will include vendor-specific nomenclature under each parameter.